CDS

Accession Number TCMCG007C24443
gbkey CDS
Protein Id XP_009138241.1
Location join(30809212..30809260,30809448..30809494,30809578..30809797,30809895..30810058,30810235..30811122,30811322..30811672)
Gene LOC103862299
GeneID 103862299
Organism Brassica rapa

Protein

Length 572aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009139993.3
Definition endo-1,4-beta-xylanase 5-like [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category G
Description glycosyl hydrolase family 10 protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01181        [VIEW IN KEGG]
EC 3.2.1.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010383        [VIEW IN EMBL-EBI]
GO:0010410        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0031176        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044036        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0045491        [VIEW IN EMBL-EBI]
GO:0045493        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097599        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGCTTCTTCTACTGCTGCTAGCCTTCTGCAGCCTTTCTCTATCAAGGAGTGAACAAAAGTATGTACCTTACGATTACTCGGCAACAATAGAGTGTCTAGAGAACCCTTATAAACCACAATACAATGGAGGGATCATCGTGAACCCTGACCTACAAAATGGTTCACAAGGCTGGGCACAATTCGCAAACGCCAAAGTCGATTTCAGAGAATTCGGAGGCAATAAGTTCGTTGTTGCACGAGGGAGGAATCAGTCTTATGACAGCGTCTCACAGAAGATTTCTTTGGAAAAGGGACTTCTCTACACTTTCTCTGCTTGGTTACAAGTAAGCAAAGGAAAGGCTCCTGTGATAGCCGTTTTCAAGAAGAATGGTGAATATAAGCATGCCGGTTCGGTTATTGCTGAATCTAAGTGCTGGTCCATGCTTAAAGGTGGTCTCACTATTGATGAATCTGGTCCTGCCGAACTTTACTTTGAGAGCGAGGACACAACCGTTGAGATATGGGTTGATAGCATCTCGTTGCAACCATTCACACAAGAAGAGTGGAACGCTCACCACGAGCAGACCATTCACAGAACGAGGAAGAGAGGCATGAGGATCAGAGCCGTAAACAGCTTAGGTGAGCCAATACCAAACGCAACAATCTCCATCGTGCAGAATAGACTTGGGTTCTCATTCGGGTGCGAGGTAGAAAAGTACATACTTGTAAACCAAGCATACCAAAACTGGTTCACTAAGAGATTCACCGTGACAACCTTCGCGAACGAGATGAAATGGTACAGCACGGAAGCAGTAAGAGGCAAAGAGGATTACACGACAGCAGACGCCATGTTAAGATTCTTCAAACAGCATGGGATCGCTGTACGTGGCCACAATATCGTATGGAACGACCCCAAGTACCAACTTAGTTGGGTGAGTTCTTTGTCTGGTAACGATCTCTACAACGCCGTGAAAAGAAGGGTTTCCTCGGTGGTCTCAAGGTACAAAGGGCAGCTTCTGAGCTGGGACGTTGTGAATGAGAATCTCCATTTCTCGTTTTTTGAGAGCAAGATGGGTCCTCAAGCCTCTTATAACATCTTTGCGTTGGCGCATTCCATCGACCCAAGGACAACAATGTTTATGAATGAATTCGACACGTTGGAGCAACCGGGAGATTCGGCTTCTAGTCCAGCAAGGTATTTAGGGAAGCTTAGAGAGCTTCAATCTATTCGTGTCGCCGGAAACATTCAGTTAGGGATCGGTCTTGAGTCTCATTTCAACATTCCTAACATTCCGTATATGAGATCAGCTCTTGACACTCTTGCTGCCACTGGTTTGCCTATTTGGCTCACTGAGGTCGACGTCCAAGCTCCTCCAAATGTCCAGGCCAAATATTTCGAGCAGGTCCTAAGGGAAGGCCATGCACATCCGCAAGTGAAAGGAATGGTGACTTGGAGTGGTTATTCTCCCTCAGGTTGCTACAAAATGTGCCTCACCGATGGAAACTTCAGGAACCTACCCACCGGAGACGTTGTGGACAAACTTCTGCGTGAATGGGGAGGGCTTCGTGGGCAAACCACAGGTTTAACTGATGCTGATGGGTTCTTTGAAGCTTCACTCTTACATGGTGACTATGATATCAGTATTGCTCATCCTCTCACTAATTCAACTGCTTCTCACCGCTTTAAGTTGACTTCTGATGACTCTCAACCATCTCGTTTTGTTGTTCATGTTTGA
Protein:  
MKLLLLLLAFCSLSLSRSEQKYVPYDYSATIECLENPYKPQYNGGIIVNPDLQNGSQGWAQFANAKVDFREFGGNKFVVARGRNQSYDSVSQKISLEKGLLYTFSAWLQVSKGKAPVIAVFKKNGEYKHAGSVIAESKCWSMLKGGLTIDESGPAELYFESEDTTVEIWVDSISLQPFTQEEWNAHHEQTIHRTRKRGMRIRAVNSLGEPIPNATISIVQNRLGFSFGCEVEKYILVNQAYQNWFTKRFTVTTFANEMKWYSTEAVRGKEDYTTADAMLRFFKQHGIAVRGHNIVWNDPKYQLSWVSSLSGNDLYNAVKRRVSSVVSRYKGQLLSWDVVNENLHFSFFESKMGPQASYNIFALAHSIDPRTTMFMNEFDTLEQPGDSASSPARYLGKLRELQSIRVAGNIQLGIGLESHFNIPNIPYMRSALDTLAATGLPIWLTEVDVQAPPNVQAKYFEQVLREGHAHPQVKGMVTWSGYSPSGCYKMCLTDGNFRNLPTGDVVDKLLREWGGLRGQTTGLTDADGFFEASLLHGDYDISIAHPLTNSTASHRFKLTSDDSQPSRFVVHV